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È possibile ottimizzare la query utilizzando la clausola EXISTS anziché IN con DISTINCT

Prova questa versione:

select contract_no AS c_no, cm_mac AS c_mc, min(tstamp) as time2, count(*) as aps
from devices d
where exists (select 1
              from devices d2
              where d2.contract_no = d.contract_no and
                    tstamp >= '2018-10-28 06:59:59' and
                    tstamp <= '2018-10-29 07:00:00'
              )
group by contract_no, cm_mac;

Vuoi un indice su devices(contract-no, tstamp) .